How to get experience with rare cases in med school
Each rare disease is rare. Together they aren’t, and your first one may turn up when nobody senior is around.

52 y/o · swelling over the eyes and face past 3 days and having difficulty in…Limited English
Swelling over the eyes and face past 3 days and having difficulty in…
Some of these are uncommon presentations. The room won’t tell you which.
You won’t see enough rare diseases on placement to learn them one by one, so train the habits that catch them: knowing the red flags, noticing when a story doesn’t fit, and asking the question that tests the unlikely answer. Read case reports, keep a personal zebra list, drill red flags weekly and take histories from simulated patients with uncommon presentations.
Rare diseases aren’t rare
Orphanet’s database covers 6,172 rare diseases. Each one is uncommon, but a conservative estimate puts the total at 3.5% to 5.9% of the population, or 263 to 446 million people at any moment.1 Of those diseases, 71.9% are genetic and 69.9% begin only in childhood.
You will meet these patients. You won’t know in advance which disease they have, so learning them one at a time won’t work. Learning to notice the pattern does.
Why the diagnosis takes years
A Rare Barometer survey of 6,507 people across 41 European countries found an average total diagnosis time of 4.7 years.2 More than half, 56%, were diagnosed more than six months after their first medical contact. Symptoms that started in childhood or adolescence were linked to longer delays.
Not every delay is avoidable. The part that starts in a consultation, with a history that doesn’t quite fit, is the part you can train for.
Think horses, then check for zebras
“When you hear hoofbeats, think of horses, not zebras” is commonly credited to Theodore Woodward of the University of Maryland School of Medicine, though the evidence for it is indirect.3 It’s good advice for the first guess. The skill is knowing when to stop trusting it:
- The story doesn’t fit the common diagnosis, or the common treatment failed
- Symptoms cross systems that don’t usually go together
- It started young, or runs in the family
- The patient has seen several doctors for the same problem
Any one of these is a reason to ask the question that tests the unlikely answer, not a reason to order every test.
What you can do alone this week
Rare-case exposure doesn’t have to wait for the right placement. Five habits you can start now:
- Read one case report a day in the specialty you’re on. Stop after the presentation, write your differential, then read the rest.
- Keep a personal zebra list: one line per condition and the clue that should have triggered it. Reread it before exams and new placements.
- Drill red flags. Pick one presenting complaint a week and list what would make it dangerous or unusual.
- Ask seniors about the case they nearly missed. You’ll learn the clue, and what it felt like to almost walk past it.
- Take histories from simulated patients with uncommon presentations, so the first strange story you hear isn’t a real one.
Use electives and specialist clinics
If your school allows it, a few days in a genetics, metabolic or pediatric specialty clinic concentrates rare disease in one room. Sit in on multidisciplinary meetings, where unusual cases get argued out loud. Rare disease charities and patient groups run events too, and hearing how someone’s diagnosis was missed sticks longer than any list.
Practice before it counts
Spin the case roulette at the top. Some of the cases in the bank are uncommon presentations, and the room won’t tell you which. Take the history, build your differential, and afterwards you’re marked against 48 criteria, including family history and the systems review.
Questions people ask
How can medical students learn about rare diseases?
Read case reports with the ending covered, keep a personal list of rare conditions with the clue for each, drill red flags by presenting complaint, spend time in specialist clinics when you can, and take histories from simulated patients.
How common are rare diseases?
Individually rare, collectively common. A conservative estimate from Orphanet data puts them at 3.5% to 5.9% of the population, or 263 to 446 million people worldwide.
What does “think horses, not zebras” mean?
Consider common causes before rare ones. The saying is commonly credited to Theodore Woodward. It’s a starting point: when the story stops fitting, look for the zebra.
Why does diagnosing a rare disease take so long?
In a European survey of 6,507 people, the average total diagnosis time was 4.7 years, and 56% were diagnosed more than six months after their first medical contact. Symptoms starting in childhood or adolescence were linked to longer delays.
Can you practice rare cases with an AI patient?
Yes. My AI Patient includes cases with uncommon presentations that you interview by voice or text. You only see the presenting complaint, so you work it out like a real history, and the consultation is marked against a 48-point rubric afterwards.
Zebras don’t introduce themselves.
Take the historySources
- Nguengang Wakap S, Lambert DM, Olry A, et al. Estimating cumulative point prevalence of rare diseases: analysis of the Orphanet database. Eur J Hum Genet. 2020;28(2):165–173.
- Faye F, Crocione C, Anido de Peña R, et al. Time to diagnosis and determinants of diagnostic delays of people living with a rare disease: results of a Rare Barometer retrospective patient survey. Eur J Hum Genet. 2024;32(9):1116–1126.
- Quote Investigator. When you hear hoofbeats look for horses not zebras. 2017.
Keep reading
- How to gain clinical experience faster in med schoolCount the patients you talk to and the feedback you get, not hours.
- AI doctor vs AI patient: which one makes you better?AI doctors answer your questions. AI patients make you ask them, and asking is the skill.
- How to become a good doctor: the skills that matterPatients judge whether you listened, explained what happens next and checked they understood.